BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033A08LP1|AL429669
(868 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1023 1713 0.0
>3x_Contig1023
Length = 4339
Score = 1713 bits (864), Expect = 0.0
Identities = 867/868 (99%)
Strand = Plus / Plus
Query: 1 atttatctgaactgactgatgtacgtgtttcaggcttcggagcaatgatatttgacattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atttatctgaactgactgatgtacgtgtttcaggcttcggagcaatgatatttgacattg 129
Query: 61 agggaccactttctgagttacgtgatatcgtccgggaaatctgtcctgcaggtccataga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 agggaccactttctgagttacgtgatatcgtccgggaaatctgtcctgcaggtccataga 189
Query: 121 aattgggtccagtgacatcatcattatcacttagttcgtcaagttcgattaataatgagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aattgggtccagtgacatcatcattatcacttagttcgtcaagttcgattaataatgagg 249
Query: 181 acactgcatcattccatttggatacttcatttctggtaaaaactggctgtacagagacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 acactgcatcattccatttggatacttcatttctggtaaaaactggctgtacagagacaa 309
Query: 241 ctgttgcgagataaaaatctttcgcatgcgagttcgatcttttatcccatttctttagta 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 310 ctgttgcgagataaaaatctttcgcatgcgagtgcgatcttttatcccatttctttagta 369
Query: 301 ccttagagaaacctgttctgtttaactctacaaattgttctaattgtgccaaatctcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ccttagagaaacctgttctgtttaactctacaaattgttctaattgtgccaaatctcttt 429
Query: 361 caaacttcttaataccatctcttatagtcctatacgcaatagatttcttcgaagtcaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 caaacttcttaataccatctcttatagtcctatacgcaatagatttcttcgaagtcaact 489
Query: 421 ttcctttcgatttgtattcatagtatctggaatttagaagatcgaacttcatacgtagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttcctttcgatttgtattcatagtatctggaatttagaagatcgaacttcatacgtagat 549
Query: 481 cagcttccttctcgagatagaactcgttgactttttccaattctctttccaatttgaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 cagcttccttctcgagatagaactcgttgactttttccaattctctttccaatttgaaga 609
Query: 541 agaaagatgctttattctcttgtaaactttggtaccgtatcgactcatccgtttcatcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 agaaagatgctttattctcttgtaaactttggtaccgtatcgactcatccgtttcatcca 669
Query: 601 atgtcatataatcatttgaatttgtataagatgaaactgctggaacagatagttgcttaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 atgtcatataatcatttgaatttgtataagatgaaactgctggaacagatagttgcttaa 729
Query: 661 tcaacttctttagagccttgtaattgatgaaatgtccattatactccggaagttctaact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tcaacttctttagagccttgtaattgatgaaatgtccattatactccggaagttctaact 789
Query: 721 gtctcccttcaaggtgtttaccaaatttcatcccaactgtttcgaccggatttcctgcac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gtctcccttcaaggtgtttaccaaatttcatcccaactgtttcgaccggatttcctgcac 849
Query: 781 agtcgtgatgtacaatattaaagtcaagcttttaatggaaaagcactgaaagaggttcca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 agtcgtgatgtacaatattaaagtcaagcttttaatggaaaagcactgaaagaggttcca 909
Query: 841 agtcacggactgaaacgttcccaacacc 868
||||||||||||||||||||||||||||
Sbjct: 910 agtcacggactgaaacgttcccaacacc 937
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7427
Number of Sequences: 1807
Number of extensions: 7427
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)